Set up simulation observation processes

Usage

Setup_Sim_Observation_Proc(
  Comp_Structure,
  Comp_Srv_Like,
  base_ISS_SrvAge,
  Srv_Like_Pars,
  Comp_Fish_Like,
  base_ISS_FishAge,
  ISS_FishAge_Pattern,
  Tag_Like,
  Tag_Like_Pars,
  SrvAgeTheta,
  FishAgeTheta,
  sim_list
)

Arguments

Comp_Structure: Composition Structure (spltR_spltS, spltR_jntS)
Comp_Srv_Like: Survey Composition Likelihoods (Multinomial, Dirichlet-Multinomial, iid-Logistic-Normal)
base_ISS_SrvAge: Input sample size for survey ages
Srv_Like_Pars: Parameters for Survey Composition Likelihoods
Comp_Fish_Like: Fishery Composition Likelihoods (Multinomial, Dirichlet-Multinomial, iid-Logistic-Normal)
base_ISS_FishAge: Base Input sample size for fishery ages
ISS_FishAge_Pattern: Input sample size pattern for fishery ages. Either "constant" or follows an f pattern ("F_pattern")
Tag_Like: Tag Likelihoods (Poisson, NegBin, Multinomial_Release, Multinomial_Recapture)
Tag_Like_Pars: Tag Likelihood Parameters
SrvAgeTheta: Survey Age Composition Overdispersion Parameter
FishAgeTheta: Fishery Age Composition Overdispersion Parameter
sim_list: Simulation list